CVE-2026-31967General(htslib / htslib)

LOWCVSS 9.1 · CRITICAL

Signal is active with 1 mentions in latest observed window

Immediate actions

  • Track advisory updates for patch or workaround availability

Recommended action window: Monitor and triage in normal cycle

NVD description

HTSlib is a library for reading and writing bioinformatics file formats. CRAM is a compressed format which stores DNA sequence alignment data. In the `cram_decode_slice()` function called while reading CRAM records, the value of the mate reference id field was not validated. Later use of this value, for example when converting the data to SAM format, could result in the out of bounds array reads when looking up the corresponding reference name. If the array value obtained also happened to be a valid pointer, it would be interpreted as a string and an attempt would be made to write the data as part of the SAM record. This bug may allow information about program state to be leaked. It may also cause a program crash through an attempt to access invalid memory. Versions 1.23.1, 1.22.2 and 1.21.1 include fixes for this issue. There is no workaround for this issue.

0.0/ 10 priority

Sources & remediation

Weakness type (CWE)
CWE-125CWE-129

Priority

LOW

Exploitation

NONE

PoC

NONE

Patch

AVAILABLE

Momentum

NONE

Are you affected?

If you run products in this scope, you should treat this CVE as relevant to your environment.

  • htslib

Threat summary

  • 1 mentions across 1 observed day

What's happening

  • General: 1 classified signal
  • 1 total mentions across 1 day

Affected systems

Vendors
Products
htslib

1 version affected across 1 product

Deep dive

Activity timeline1 mentions / 1d
00111Mentions · 2026-03-18: 103-18
Signal classification1 categories
General
1100.0%
Referenced assets1 URL
By indicator
Full discourse1 post
  • CVE@CVEnew
    General

    CVE-2026-31967 HTSlib is a library for reading and writing bioinformatics file formats. CRAM is a compressed format which stores DNA sequence alignment data. In the `cram_decode_sli… https://www.cve.org/CVERecord?id=CVE-2026-31967

    Post summary

    The post references CVE-2026-31967 with only minimal context, offering no actionable details or insights into the vulnerability.

    0000064
    56.7K followersView on X
CPE platform detail2 entries

2 of 2 entries

PartVendorProductVersionTarget SWTarget HW
Apphtslibhtslib---
Apphtslibhtslib1.23--

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